Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_030927.1 Length=45858 Score E Sequences producing significant alignments: (Bits) Value seq49429 179 1e-40 >seq49429 Length=1101 Score = 179 bits (198), Expect = 1e-40 Identities = 219/299 (73%), Gaps = 0/299 (0%) Strand=Plus/Plus Query 36222 GAACTGCGGTTCACTCCGTCCGGCGCGGCGGTCGCGAACTTCACGGTCGCTTCGACTCCG 36281 ||||| || ||||| || |||| |||||||||||||||||||| ||||| || ||||| Sbjct 3 GAACTTCGATTCACCCCCGCCGGTGCGGCGGTCGCGAACTTCACCGTCGCGTCCACTCCC 62 Query 36282 CGACAGTTCGACCGGGACGCGAACGAGTGGAAGGACGGCGATCCGCTGTTCATGCGCTGC 36341 || ||||| || | | |||||||||||||||||||| |||||||| | |||||| Sbjct 63 CGCACCTTCGATCGCCAGACCAACGAGTGGAAGGACGGCGACGCGCTGTTCCTCCGCTGC 122 Query 36342 AACCTGTGGCGTGACGCGGCGGAGAACGTCACGGACTCGCTGTCGAAGGGGACTCGGGTC 36401 ||| | |||||||| || |||||||||||| | || || ||| | || | ||||| Sbjct 123 AACATCTGGCGTGAGGCAGCGGAGAACGTCGCCGAGTCCCTGACTCGCGGCGCACGGGTG 182 Query 36402 ATCGTGCAGGGCCGGCTGAAACAGCGGAGCTACGAGGACAAAGAGGGCGTCACGCGGACC 36461 |||| ||||||||| ||||| || |||| ||||| | | ||| || Sbjct 183 GTCGTCACGGGCCGGCTCCGGCAGCGTTCCTTCGAGACGCGTGAGGGTGAGAAGCGCACT 242 Query 36462 ATCGTCGAGCTGGAAGTGGACGAGATCGGTCCGTCCCTGAAGTACGCGACGGCGAACGT 36520 ||||||| || || || |||||| |||| || || || ||||||||||| || || Sbjct 243 GTCGTCGAACTCGAGGTCGACGAGGTCGGCCCTTCGCTCCGCTACGCGACGGCCAAGGT 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146517145010800