Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_031052.1 Length=57804 Score E Sequences producing significant alignments: (Bits) Value seq6786 84.2 8e-12 >seq6786 Length=20090 Score = 84.2 bits (92), Expect = 8e-12 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 38405 GCGACGCGTGCCCGAGGAGCACCTGGACCGCCCGCAGGTTCCGAGACCCACGGTAGGCGC 38464 |||| ||||| ||||| || | || ||| | || || || | | |||||| | Sbjct 15613 GCGATGCGTGGCCGAGTAGGTCTTGCACCACGAACACGTCGCGGGTGGCCCGGTAGACCT 15672 Query 38465 GCGTAGCGAACCGGTGCCGCAACGTGTGCATCGTCCAGCCGCCCGGCAGCGCCTCCGCGC 38524 || |||| ||||| |||| || |||||||||| ||| ||||||| | |||| Sbjct 15673 TGGTGCCGAAGCGGTGGCGCAGCGCGTGCATCGTCACGCCCTCCGGCAG-GAGGCCGCCG 15731 Query 38525 AC-AGCGTCCCGACCCATCGCGGTGACAGGTGGCCGCCGTCGTTGCCCGGGAAGAGGTAG 38583 || | | | |||||||| || || ||||||||||||||| | ||| ||||| ||||| Sbjct 15732 ACGATCTTGCCGACCCACCGAGGGGACAGGTGGCCGCCGGCCGCGCCGGGGAACAGGTAC 15791 Query 38584 CCGGTCCGCG 38593 ||| ||||| Sbjct 15792 CCGCCCCGCG 15801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184716486222040