Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq46235 93.3 2e-14 >seq46235 Length=1443 Score = 93.3 bits (102), Expect = 2e-14 Identities = 186/267 (70%), Gaps = 24/267 (9%) Strand=Plus/Minus Query 57598 CACGTCAGCGTCTTGCTCGATCGAGCCTGATCCGCGCAGGTCGGAGATCTCCGGCGGTCG 57657 || ||| ||||| |||||||||||||| || |||||||||| || | || ||||| || Sbjct 1398 CATGTCGGCGTCCTGCTCGATCGAGCCCGACTCGCGCAGGTCCGACAGCTGCGGCG-TCT 1340 Query 57658 ACTGTCGGTCGCGGTGTTGCG-------GTTGAGCTGGACGGCGGAGACTGAGGCGGC-G 57709 ||||||| ||| || | || ||| |||||| | | ||| || | ||| | Sbjct 1339 --TGTCGGT-GCGCTGCTCCGAACCACGGTTCAGCTGGCTGATCGCGAC-GACGGGGCAG 1284 Query 57710 TTGCACTCCTTGGCGACCTGGCGGATGCCCTGGCTGATCTCT------TCGAGCTGCTCG 57763 | | ||||||||||| | | ||| | |||||| ||| |||| ||| | Sbjct 1283 TCGAGCTCCTTGGCGAGCAGCTTGATCGCGCGGCTGAACTCCGAGACCTCGACCTGGCGG 1224 Query 57764 TGC-CGATCCTTCTTGCCGCCGGTCTTCATGAGCTGCATGTAGTCGAACATGAAGAGGTC 57822 | | ||| |||||||||| | | |||||||||||| |||||||| || || ||| || Sbjct 1223 TTCTCGA-CCTTCTTGCCC---GACGTCATGAGCTGCAGGTAGTCGAGCACGATGAGCTC 1168 Query 57823 GATGCCCTCCTGCTCGTGGATGCGTCG 57849 || ||| | ||||| | |||||| || Sbjct 1167 GAGGCCGTGCTGCTTCTTGATGCGCCG 1141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 295909709594370