Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_031102.1 Length=42429 Score E Sequences producing significant alignments: (Bits) Value seq8480 82.4 2e-11 >seq8480 Length=73609 Score = 82.4 bits (90), Expect = 2e-11 Identities = 201/296 (68%), Gaps = 9/296 (3%) Strand=Plus/Plus Query 24021 TTCGGAGCTCGCTGGGGAACACAGCACCGCGGGCTCGACTTCGCCGCCAAGGACGGAACG 24080 ||||| || || |||||||| || ||| |||| | ||| |||||| | | ||| || Sbjct 56283 TTCGGGGCGCGGTGGGGAACCCAACACAACGGGATGGACATCGCCGGCCCGATCGGCACT 56342 Query 24081 CCGATCTATGCGG-CGCAGGCCGGCACCGTGGCCTATATCGGGCCGGCGCAAGGCTTCGG 24139 || ||||| || ||| | | ||| ||| || | || |||||| || ||||| Sbjct 56343 CCCATCTACGCCTACGCCGAC-GGCGTCGTCTCCAAGGCAGGACCGGCGTCCGGGTTCGG 56401 Query 24140 GCAATGGATCGTGATTGACCACCCGGCCG-CGGACGGCGCCGGCACAACCGTCTACGGGC 24198 | |||||||| | |||||| || ||| |||| | | | | ||||||||||| | Sbjct 56402 CAACTGGATCGTCCTCGACCACAACATCGACGGCCGGCTC-GTCTCCACCGTCTACGGAC 56460 Query 24199 ACATGTGGAACGCGTTCGC-GACCGGGCTCAAGGCCGGCGATCGCGTCCAGGCCGGCCAA 24257 |||||| | || || | | || | |||| ||| || || ||| ||||| || Sbjct 56461 ACATGTT---CTCGGGCGGAGTGCTGG-TGAAGGTCGGGGACCGGGTCGCCGCCGGGCAG 56516 Query 24258 CTCATTGCCTACGTCGGCGCCAACGGGCAGTCGACGGGCCCGCACCTGCACTTCGA 24313 | ||| || ||| ||| | |||| ||||| || || |||||||||||||||| Sbjct 56517 CACATCGCGAACGAAGGCAACGACGGCCAGTCCACCGGTGCGCACCTGCACTTCGA 56572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135552341644540