Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_031230.1 Length=98136 Score E Sequences producing significant alignments: (Bits) Value seq49429 84.2 1e-11 >seq49429 Length=1101 Score = 84.2 bits (92), Expect = 1e-11 Identities = 184/273 (67%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 74581 GCGGTAGCCAATTTCACTGTGGTGTCAAATCCCCGGAGATTCGACAAGCAAACGAATTCC 74640 ||||| || || ||||| || | ||| | |||||| | ||||| || || || Sbjct 30 GCGGTCGCGAACTTCACCGTCGCGTCCACTCCCCGCACCTTCGATCGCCAGACCAACGAG 89 Query 74641 TGGATTGACGAGGAGCCATGGTTCGTACGTTGCAACATCTGGCGTGACGCGGCCGAGAAT 74700 |||| |||| || | |||| | || ||||||||||||||||| || || ||||| Sbjct 90 TGGAAGGACGGCGACGCGCTGTTCCTCCGCTGCAACATCTGGCGTGAGGCAGCGGAGAAC 149 Query 74701 GCCGCAGAGTCGCTTGACAAG-GGCACTCGAGTGATCGTCCAGGGGCGTCTCAAGTCCCG 74759 | ||| ||||| | |||| | ||| | || ||| ||||| ||| || ||| | || Sbjct 150 GTCGCCGAGTC-CCTGACTCGCGGCGCACGGGTGGTCGTCACGGGCCGGCTCCGGCAGCG 208 Query 74760 GTCATATACCACCAACGAAGGCGAGGATCGAACGGTCCTTGAGCTCGAGGTCGATGAGAT 74819 || | || || || ||| | || || ||| | || ||||||||||| ||| | Sbjct 209 TTCCTTCGAGACGCGTGAGGGTGAGAAGCGCACTGTCGTCGAACTCGAGGTCGACGAGGT 268 Query 74820 CGGACCCTCGCTGCAGTGGGCCACTGCTAAGGT 74852 ||| || ||||| | | || || || ||||| Sbjct 269 CGGCCCTTCGCTCCGCTACGCGACGGCCAAGGT 301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313675611697290