Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_031252.1 Length=51290 Score E Sequences producing significant alignments: (Bits) Value seq49429 143 9e-30 >seq49429 Length=1101 Score = 143 bits (158), Expect = 9e-30 Identities = 191/258 (74%), Gaps = 8/258 (3%) Strand=Plus/Plus Query 30976 GCTGTCGCGAACTTCACGATCGCGAGCACACCGCGAACGTTCGATCGACAGTCAAACGAG 31035 || |||||||||||||| ||||| ||| || || || |||||||| ||| | |||||| Sbjct 30 GCGGTCGCGAACTTCACCGTCGCGTCCACTCCCCGCACCTTCGATCGCCAGACCAACGAG 89 Query 31036 TGGAAAGACGGCGAGACGCTCTTCCTGCGC-GCTGCTGTCTGGCGCGAGACTGCAGAGAA 31094 ||||| |||||||| |||| ||||| ||| || | ||||||| ||| | || ||||| Sbjct 90 TGGAAGGACGGCGACGCGCTGTTCCTCCGCTGCAAC-ATCTGGCGTGAGGCAGCGGAGAA 148 Query 31095 TGTCGCAGAGTCCCTG--CAGAAGGGCA-TGGAGGTCATCTGCGTCGGGCGTCTGAAGTC 31151 ||||| ||||||||| | | ||| || |||| || || || || || | Sbjct 149 CGTCGCCGAGTCCCTGACTCGCGGCGCACGGGTGGTCGTC-ACG--GGCCGGCTCCGGCA 205 Query 31152 GCGCAGCTACGAGACGAAAGAGGGCGAGAAGCGCACTGTCATCGAGCTCGAAGTCGACAG 31211 ||| || ||||||| ||||| ||||||||||||||| |||| ||||| |||||| Sbjct 206 GCGTTCCTTCGAGACGCGTGAGGGTGAGAAGCGCACTGTCGTCGAACTCGAGGTCGACGA 265 Query 31212 CATCGGCCCGTCGCTGCG 31229 ||||||| ||||| || Sbjct 266 GGTCGGCCCTTCGCTCCG 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163886877260880