Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Homalodisca_20vitripennis_20[genbank_20GCA_5F000696855.1_202014-06- 05] 61,370 sequences; 2,246,365,390 total letters Query= NC_031253.1 Length=77832 Score E Sequences producing significant alignments: (Bits) Value seq6786 127 1e-24 seq6353 104 1e-17 >seq6786 Length=20090 Score = 127 bits (140), Expect = 1e-24 Identities = 318/474 (67%), Gaps = 48/474 (10%) Strand=Plus/Plus Query 38569 GGCCGCGGCTTCCATCGCGG--CGC-GTGTCTCGGCATCGTCCACGGCGGTGTACCGCTC 38625 |||||| ||||| | ||| | ||| ||| || | ||| ||||| || | || Sbjct 15545 GGCCGCCGCTTCGACCGCCGACCGCAGTGAGTCCGTCTCGACCACGACGTAGGTGCGAGT 15604 Query 38626 GGTGACCGCGACGTTGGCGTGGCCCAGGAGCGTCT-GCACAGCGCGCAGGTTGCGCGTGC 38684 |||||||| || || ||||||| || || |||| |||| || || || ||| ||| Sbjct 15605 GGTGACCGG--CGATG-CGTGGCCGAGTAG-GTCTTGCACCACGAACACGTCGCGGGTGG 15660 Query 38685 CGCGATAGGCGCGGGTAGCGAACCTATGACGGAGGGTGTGCATGGTC----CACCCGGCA 38740 | || ||| | ||| |||| | || || || | |||||| ||| | |||||| Sbjct 15661 CCCGGTAGACCTTGGTGCCGAAGCGGTGGCGCAGCGCGTGCATCGTCACGCCCTCCGGCA 15720 Query 38741 GGCATGGCCTCAGCGACCATCTTGCCGACCCACCTAGGCGATAGGTGGCCGTTGTCGTCG 38800 || |||| | |||| |||||||||||||||| ||| || ||||||||| | | || Sbjct 15721 GGA--GGCCGC--CGACGATCTTGCCGACCCACCGAGGGGACAGGTGGCCGCCGGCCGCG 15776 Query 38801 CCGGGAAACAGGTACCCCTCCTCCCCGTAGGCCGCCATCTCCGGGCTGTGCCCGGGCGCG 38860 ||||| ||||||||| || ||||| || ||| | ||| |||| Sbjct 15777 CCGGGGAACAGGTAC----CCGCCCCG--------------CGAGCT---CGCGGCCGCG 15815 Query 38861 CCCTGGGCGATCAGGTCGGCCAGCTCGTAGGTGATGGGCACGACCCGTTCCCGGTTGCCC 38920 | | || ||||||| | || ||||| ||| | || ||||| |||| |||| Sbjct 15816 ACGTCGG---------CGGCCAGGTTGTCGGTGAGGGGGATGAGCCGTTGCCGGCCGCCC 15866 Query 38921 TTGCCGTGGATGAGCAGC-TGGGGTCCGTCGAACCCCTCGCGGAGGTCGCGAGTGTGGAC 38979 |||||| || | ||||| || || | ||| | ||||| |||||||| | ||||| Sbjct 15867 TTGCCGGTGACGCGCAGCGTGCGGCCGGTC-AGGTCCTCGGTAAGGTCGCGGGCGTGGAG 15925 Query 38980 CACCGCCACCTCGGCGCGCCGCAGACCCACCTCCCCGGCCAACCGCATCATCAG 39033 | ||||||||||||||||| || || |||| | |||| |||| ||| || Sbjct 15926 GCCGGCCACCTCGGCGCGCCGGAGTCCGCCCTCGGCCGCCAGGCGCAGCATGAG 15979 >seq6353 Length=16144 Score = 104 bits (114), Expect = 1e-17 Identities = 68/75 (91%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 32891 GGGGCGGTAGCTCAGTCGGTTAGAGCCACGGACTCATAATCCGTTGGTCGTGGGTTCGAG 32950 |||||||||||||||||||| |||||| ||||||||||||| ||||||| ||||||||| Sbjct 7452 GGGGCGGTAGCTCAGTCGGTCAGAGCCGTGGACTCATAATCCATTGGTCGCGGGTTCGAG 7511 Query 32951 CCCCACCCGCCCTAC 32965 |||| ||||||| || Sbjct 7512 CCCCGCCCGCCCCAC 7526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248751407900010