Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_002484.2 Length=56426 Score E Sequences producing significant alignments: (Bits) Value seq2224 98.7 4e-16 >seq2224 Length=1872321 Score = 98.7 bits (108), Expect = 4e-16 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 48923 TGGCCAGGGAGATCGGATGCCCGGTGCTCCCGCTCTGCCAGCTCAACCGCGGATGTGAGT 48982 |||||| |||| | ||||| ||| | |||| | ||||||||||| | ||| Sbjct 1509504 TGGCCAAGGAGTTGAACTGCCCTGTGATTGCGCTGTCTCAGCTCAACCGAAGTGTTGAAA 1509563 Query 48983 CTCGCCCGGATAAGCGCCCGGTGCTCAGCGACCTACGCGAGTCCGGCGCCATCGAGCAAG 49042 |||| || || ||||| || || | |||||||| || ||||| ||||| |||||||| | Sbjct 1509564 CTCGGCCTGACAAGCGGCCCATGATGAGCGACCTGCGGGAGTCGGGCGCTATCGAGCAGG 1509623 Query 49043 ACGCGGACATCGTGATGTTCGTGTACCGCGATGA 49076 |||||||| | | |||||| | || |||||||| Sbjct 1509624 ACGCGGACGTGATCATGTTCATCTATCGCGATGA 1509657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180403030608000