Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20]
18,000 sequences; 550,885,727 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq16236 96.9 3e-15
seq9774 96.9 3e-15
>seq16236
Length=166078
Score = 96.9 bits (106), Expect = 3e-15
Identities = 117/157 (75%), Gaps = 2/157 (1%)
Strand=Plus/Plus
Query 20400 AATGGCTTTGCCTCCATGTCATATGCTA-TGCCAATTTTACGTTGCTAATAATGAATTGT 20458
|||||| ||||||| || ||| |||| || || ||||||||||| ||| || |||
Sbjct 14794 AATGGCACTGCCTCCCTGCCAT-TGCTTGTGTCAGTTTTACGTTGCCAATGGCGAGCTGT 14852
Query 20459 CGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAA 20518
| ||||| |||| || ||||| ||||| ||||| || ||||| || || || || || |
Sbjct 14853 CTTGTCAGCTGTACCAGCGATCTGCTGACATGGGCCTCGGTGTGCCATTTAACATCGCCA 14912
Query 20519 GTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555
| ||||| ||||| || | ||||| || || || ||
Sbjct 14913 GCTATGCTCTGCTCACCTGCATGATCGCTCAGGTCAC 14949
>seq9774
Length=82367
Score = 96.9 bits (106), Expect = 3e-15
Identities = 117/157 (75%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 20400 AATGGCTTTGCCTCCATGTCATATGCTA-TGCCAATTTTACGTTGCTAATAATGAATTGT 20458
|||||| ||||||| || ||| |||| || || ||||||||||| ||| || ||||
Sbjct 81064 AATGGCACTGCCTCCCTGCCAT-TGCTTGTGTCAGTTTTACGTTGCCAATGGCGAGTTGT 81006
Query 20459 CGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAA 20518
| ||||| |||| || ||||| ||||| ||| | || || || || || || || || |
Sbjct 81005 CTTGTCAGCTGTACCAGCGATCTGCTGACATGAGCCTCGGCGTGCCATTTAACATCGCCA 80946
Query 20519 GTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555
| ||||| ||||| || | |||||||| || || ||
Sbjct 80945 GCTATGCTCTGCTCACCTGCATGATTGCTCAGGTCAC 80909
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399096429010000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |