Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq9360 89.7 4e-13 >seq9360 Length=410125 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || ||||| || | || |||| ||| || || || || || || ||||||||||||| | Sbjct 230816 CCACCCCGCAGACGTAGCACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAC 230757 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || || ||||||||| || ||||| ||| ||||||| | |||||||| || Sbjct 230756 AGGGTGCGACCATCTTCCAACTGCTTGCCAGCAAAGATAAGACGCTGTTGATCGGGAGGG 230697 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||||||||| ||||| ||| || | | | || || || ||| Sbjct 230696 ATTCCTTCCTTATCTTGAATTTTGGCCTTCACGTTCTCGATGGTATCGGAGGCCTCCACC 230637 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || | |||||| | ||||| |||| || || ||||| || ||||| Sbjct 230636 TCCAGAGTGATGGTCTTGCCAGTCAGGGTCTTCACAAAGATCTGCAT 230590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379260781410000