Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq10494 87.8 2e-12 >seq10494 Length=32657 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/190 (71%), Gaps = 6/190 (3%) Strand=Plus/Minus Query 62683 CGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGG---CTATCAA 62739 || |||| ||||| ||||| || | ||| || || | ||| || ||| || |||| Sbjct 4756 CGAAATAGATGGTCTCAAAAATGTCCTTGTTCAGTTTTTGAGC---CGGTTCACTGTCAA 4700 Query 62740 ATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTC 62799 |||| || | | || || ||||| || || ||||||| ||||||||| ||||||| Sbjct 4699 ATGGCATCTTCATCATTATGAAGGCGTCTGCCAAACCTTGAATACCAATACCTATAGGTC 4640 Query 62800 TATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTT 62859 |||| | |||||| | || ||||| || | ||||| ||||| | || || |||| Sbjct 4639 TATGACGCTTATTGCTTTTCTCGGCTTCAGGTACCGGATAGTAATTTACGTCGATGATTT 4580 Query 62860 TATTGAGATT 62869 | ||||| || Sbjct 4579 TGTTGAGGTT 4570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629675891040000