Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq1 116 7e-22 >seq1 Length=2207822 Score = 116 bits (128), Expect = 7e-22 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 357 TTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACC 416 ||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||| Sbjct 1918784 TTGGTGGGTCGTGCGGGACTCGAACCTGCGACCAACGGATTAAAAGTCCGCTGCTCTACC 1918843 Query 417 GACTGAGCTAACGACCC 433 |||||||||||||||| Sbjct 1918844 AACTGAGCTAACGACCC 1918860 Score = 113 bits (124), Expect = 9e-21 Identities = 70/75 (93%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 353 ATTATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTC 412 ||| |||||||| | |||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1918590 ATTCTTGGTGGGCCCTGAAGGATTCGAACCTTCGACCAACGGATTAAGAGTCCGCTGCTC 1918649 Query 413 TACCGACTGAGCTAA 427 |||| |||||||||| Sbjct 1918650 TACCAACTGAGCTAA 1918664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100682474520000