Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq16236 150 2e-31 seq9774 138 1e-27 >seq16236 Length=166078 Score = 150 bits (166), Expect = 2e-31 Identities = 151/196 (77%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 ||||| ||||| |||||||||| | || || || || ||||||||||||||||| || Sbjct 14955 AGGCCGGTGACCTGAGCGATCATGCAGGTGAGCAGAGCATAGCTGGCGATGTTAAATGGC 14896 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || |||||||||||||| || || | |||||||||||| || |||||||| || || Sbjct 14895 ACACCGAGGCCCATGTCAGCAGATCGCTGGTACAGCTGACAAGACAGCTCGCCATTGGCA 14836 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGG 21170 ||||||||||||||||| || || ||||| || ||||| | || ||| || ||| Sbjct 14835 ACGTAAAACTGACACAAGCAATGGCAGGGAGGCAGTGCCATTTCAGGGATGTCAGCTGGG 14776 Query 21171 TTCCACGCGCACATAA 21186 ||||| || ||| || Sbjct 14775 TTCCAAGCAGACAAAA 14760 >seq9774 Length=82367 Score = 138 bits (152), Expect = 1e-27 Identities = 148/196 (76%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 20991 AGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGG 21050 ||||| ||||| ||||| |||| | || || || || ||||||||||||||||| || Sbjct 80903 AGGCCGGTGACCTGAGCAATCATGCAGGTGAGCAGAGCATAGCTGGCGATGTTAAATGGC 80962 Query 21051 ACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCC 21110 || ||||||| |||||| || || | |||||||||||| || |||| ||| || || Sbjct 80963 ACGCCGAGGCTCATGTCAGCAGATCGCTGGTACAGCTGACAAGACAACTCGCCATTGGCA 81022 Query 21111 ACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGG 21170 ||||||||||||||||| || || ||||| || ||||| | || ||| || ||| Sbjct 81023 ACGTAAAACTGACACAAGCAATGGCAGGGAGGCAGTGCCATTTCAGGGATGTCAGCTGGG 81082 Query 21171 TTCCACGCGCACATAA 21186 ||||| || ||| || Sbjct 81083 TTCCAAGCAGACAAAA 81098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427682156640000