Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_004333.2 Length=48247 Score E Sequences producing significant alignments: (Bits) Value seq2224 80.6 8e-11 >seq2224 Length=1872321 Score = 80.6 bits (88), Expect = 8e-11 Identities = 75/93 (81%), Gaps = 3/93 (3%) Strand=Plus/Plus Query 17815 GGAGACGTGGCTGAGTGGTCGAAAGCGCTCCCCTGCTAAGGGAACGCCTG-GAGTAATCT 17873 ||||||||| | |||||| |||| | ||||||||||||||||| | || | || Sbjct 1490097 GGAGACGTGACCGAGTGGCCGAAGGTGCTCCCCTGCTAAGGGA--GTATGCGCCAAAAGC 1490154 Query 17874 GGGTCGAGGGTTCGAATCCCTCCGTCTCCGCCA 17906 | |||||||||||||||||||||||||||||| Sbjct 1490155 GCATCGAGGGTTCGAATCCCTCCGTCTCCGCCA 1490187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 154235825044000