Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq2224 140 2e-28 >seq2224 Length=1872321 Score = 140 bits (154), Expect = 2e-28 Identities = 275/397 (69%), Gaps = 15/397 (4%) Strand=Plus/Plus Query 8225 GCATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGA 8284 ||||| || |||||||| ||||||||||| |||| ||||||| ||| |||||| || | Sbjct 775024 GCATCCACGCCAATGTGCGCCTTCATGCCGAAGTACCACTGACCGCCCTTCTTGCTCGGC 775083 Query 8285 TGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATG 8344 | ||||||||||| ||||| || ||||||||||||||| || || |||| | Sbjct 775084 TTCATCTCCGGATTGCGTTCGCCCTGGGCGTTCTTGGTCGAGCTTGGCGCGGCAATCAGT 775143 Query 8345 GTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCC--TGCTTCGGCCAGC-CAGCGA 8401 ||||| || |||| |||||| | ||| | ||| |||| || |||| | || Sbjct 775144 GTGGCGTCCACCACCGTGCCTGCGCGAAGCATCAGGCCTTTGCTGCG--CAGCAGATCG- 775200 Query 8402 TTGATGGTCTTGAACAAT-TGGCGGGCCAGTTGATGCTGCTCCAGCAGGTGGCGGAAATT 8460 ||||| ||| |||| || ||| | |||| | |||| |||||||| | | || || Sbjct 775201 TTGATCGTC-TGAAGGATCTGGGGTGCCATCTTGTGCTTCTCCAGCACGCGCCGAAACCG 775259 Query 8461 CATGATGGTGGTGCGGTCCGGCA-AGGCGCTATCCAGGGATAACCGGGCAAACAGACGCA 8519 || ||||||||| |||||| | ||| | |||| ||| | | | | | | | Sbjct 775260 CAGGATGGTGGTCTTGTCCGGGACCGGCTCATTCCA--GATTCCAAGACCAGCGAAGTCC 775317 Query 8520 TGGA----GGCGATTTCGTACAGAGCATCTTCCATCGCGCCATCGCTCAGGTTGTACCAA 8575 ||| | || || ||| || |||||||| || |||||||||||| |||| Sbjct 775318 CGGAACAGCACCATGTCACGCAGCGCCTCTTCCATGGCCGGGTCGCTCAGGTTGAACCAC 775377 Query 8576 TGCTGCATGCAGTGAATGCGTAGCATGGTTTCCAGCG 8612 ||||||||| | ||||| || ||||| ||||| || Sbjct 775378 TGCTGCATGAAATGAATTCGCAGCATCACTTCCACCG 775414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 303168677778000