Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq2224 84.2 3e-11 >seq2224 Length=1872321 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/84 (82%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 165219 TGCCCAAGTGGCGGAATTGGTAGACGCGCTGGGTTTAGGTTCCAGTGAATTAATTCGTGG 165278 |||||| |||||||||||||||||||| || | || |||| | || | | | | ||||| Sbjct 1348748 TGCCCAGGTGGCGGAATTGGTAGACGCACTAGTTTCAGGTACTAGCGGGTAACTCCGTGG 1348689 Query 165279 AGGTTCAAGTCCTCTCTTGGGCAC 165302 |||||| ||||||||| ||||||| Sbjct 1348688 AGGTTCGAGTCCTCTCCTGGGCAC 1348665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627826707200000