Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_006938.1 Length=63649 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 2e-13 >seq1 Length=2207822 Score = 89.7 bits (98), Expect = 2e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 9399 CTCTGGGAGATGATCATGCGGTCCACGTGGGACTGGGCCGAGCCCGGCACCCTGTTCATC 9458 || ||||| ||||||||| ||||| | ||| |||||||||||| |||||| | Sbjct 722714 CTGTGGGACCAGATCATGCGCTCCACCTACGACCATGCCGAGCCCGGCGTGCTGTTCTTG 722773 Query 9459 GACCAGATCAACCGCATGAACAATCTCAAGTACTGCGAGACCATCGCCGCCACCAATCCC 9518 |||| ||||||| ||||| |||| |||||||| ||| | |||||||| || Sbjct 722774 GACCGCATCAACCAAGACAACAACCTCAGCTACTGCGAAGACATTTCTGCCACCAACCCT 722833 Query 9519 TGCGGCGAGCAGCCCCTCCCACCGTACGGTGCCTGCCTCTTGGGCTC 9565 || | |||||||| || || || || ||| |||| | ||||||| Sbjct 722834 TGTGCGGAGCAGCCGCTGCCTCCCTATGGTTGCTGCTGCCTGGGCTC 722880 Score = 89.7 bits (98), Expect = 2e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 9399 CTCTGGGAGATGATCATGCGGTCCACGTGGGACTGGGCCGAGCCCGGCACCCTGTTCATC 9458 || ||||| ||||||||| ||||| | ||| |||||||||||| |||||| | Sbjct 725249 CTGTGGGACCAGATCATGCGCTCCACCTACGACCATGCCGAGCCCGGCGTGCTGTTCTTG 725308 Query 9459 GACCAGATCAACCGCATGAACAATCTCAAGTACTGCGAGACCATCGCCGCCACCAATCCC 9518 |||| ||||||| ||||| |||| |||||||| ||| | |||||||| || Sbjct 725309 GACCGCATCAACCAAGACAACAACCTCAGCTACTGCGAAGACATTTCTGCCACCAACCCT 725368 Query 9519 TGCGGCGAGCAGCCCCTCCCACCGTACGGTGCCTGCCTCTTGGGCTC 9565 || | |||||||| || || || || ||| |||| | ||||||| Sbjct 725369 TGTGCGGAGCAGCCGCTGCCTCCCTATGGTTGCTGCTGCCTGGGCTC 725415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203507345780000