Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq1 100 3e-16 >seq1 Length=2207822 Score = 100 bits (110), Expect = 3e-16 Identities = 154/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 7001 ACAGCTTGGTTTGCCTGTGAACCGGAATGGGGTTGAACGTTTGCGAAATTGCAACTAAAC 7060 || |||||||| ||||| || ||||| | || || || || ||||||||| || |||| Sbjct 1508258 ACGGCTTGGTTGGCCTGCGAGCCGGAGTTCGGCTGCACATTGGCGAAATTGGCACCAAAC 1508199 Query 7061 AGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATCTCATCGGCTTTTACACAACCGCCG 7120 | | || |||| || || ||||| | ||| | | | ||| | ||| | || || ||| Sbjct 1508198 AACTGCTTCACACGGTCGATGGCCAGTTGCTCAACCACGTCGACGTTTTCGCAGCCACCG 1508139 Query 7121 TAATACCGTTTGCCTGGATATCCCTCAGCATACTTGTTGGTAAAAATAGAACCTTGCGCT 7180 || || || ||||| || || || ||||| ||||||||||| | || |||||||| Sbjct 1508138 TAGTAGCGCTTGCCGGGGTAGCCTTCAGCGTACTTGTTGGTCAGCTGCGAGCCTTGCGCA 1508079 Query 7181 TTCATAACATCATCGGACACATAGTTTTCGGATGCAATCA 7220 ||| ||| | || ||||| ||||| || |||| Sbjct 1508078 GCCATCACAGCGGGCGAGGTGTAGTTCTCGGAGGCGATCA 1508039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553229095440000