Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq16236 89.7 1e-12 >seq16236 Length=166078 Score = 89.7 bits (98), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 8/230 (3%) Strand=Plus/Plus Query 111595 TCATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACC 111654 ||||||| ||| |||| || || || || || | ||| || ||| ||||||| Sbjct 14718 TCATTGAAAGAATCAAGACAAATCCCACAGACCGCCGTTTGATTTTGTCTGCTTGGAACC 14777 Query 111655 CAAATG-CAT---TGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTAT 111710 || || ||| || |||||||||| || || || ||| |||| |||||||| Sbjct 14778 CAGCTGACATCCCTG----AAATGGCACTGCCTCCCTGCCATTGCTTGTGTCAGTTTTAC 14833 Query 111711 GTACACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGT 111770 || | | || ||| || || || |||| |||||||||||||| || || || ||| Sbjct 14834 GTTGCCAATGGCGAGCTGTCTTGTCAGCTGTACCAGCGATCTGCTGACATGGGCCTCGGT 14893 Query 111771 GTTCCGTTTAATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCA 111820 || || ||||| || || || || || || || || ||| | |||||||| Sbjct 14894 GTGCCATTTAACATCGCCAGCTATGCTCTGCTCACCTGCATGATCGCTCA 14943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303053014076000