Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq1 172 2e-38 >seq1 Length=2207822 Score = 172 bits (190), Expect = 2e-38 Identities = 295/422 (70%), Gaps = 16/422 (4%) Strand=Plus/Minus Query 35486 TTGCCGGCCTATGCCACCGAAGCCAGTGCAGGCATGGACCTGCGTGCCGCACTGGAGGCG 35545 ||||| |||||||||||| | ||| |||||| |||| |||| ||| || || || Sbjct 1381892 TTGCCCGCCTATGCCACCCCCGGCAGCGCAGGCCTGGATTTGCGCGCCTGCCTAGATGCT 1381833 Query 35546 CCGATGACGTTGCAGCCGGGCGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTG 35605 | || | | ||||||| | | ||| || |||| |||| | || | ||| | Sbjct 1381832 GCCTTGGTGCTAGAGCCGGGGCAGACCCAGCTCATCCCCACCGGCTTGGCAGTGCATATT 1381773 Query 35606 GCCGACCCGCAGCTGTGCGCGG---TGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCAC 35662 || ||||| ||| ||||| ||||||||||||||||||||||||||||| ||| Sbjct 1381772 GCGGACCCAGGGCT---CGCGGCCATGATCCTGCCGCGCTCGGGGCTTGGCCATAAGCAC 1381716 Query 35663 GGCATCGTACTCGGCAAC--GGTACCGGCCTCATCGATGCGGATTACCAGGGGTCGTTGT 35720 |||||||| || |||||| ||| ||| | ||||| | || |||||||| | | Sbjct 1381715 GGCATCGTGCTGGGCAACTTGGTG--GGCTTGATCGACTCAGACTACCAGGGTCAGCTCA 1381658 Query 35721 TGATCAGCACCTGGAATCGCGGCCGCGAGGCCTTCACCATCGAGCCGGGCGACCGGATTG 35780 || | ||| |||||| || ||| | || |||||||||||||| || || |||| Sbjct 1381657 TGGTGAGCTGCTGGAACCGGGGCTCCACCGCTTTCACCATCGAGCCCATGGAGCGCATTG 1381598 Query 35781 CGCAGCTGGTGATCCTGCCGGTCGTGCGCGTAGGCTT---GCGAGTGGTGGACACTTTCG 35837 |||| |||| ||| ||||||| |||| || | ||| ||| |||| || |||| | Sbjct 1381597 CGCAAATGGTCATCGTGCCGGTGGTGCAGGTGGCCTTCAGGCGGGTGGAGG--CCTTTGG 1381540 Query 35838 TCGACAGCGCGCGCGGCGCGGGTGGATTCGGTCACACCGGCGTGCGCTGACTGGCTAAGT 35897 | || |||| |||||| ||||| || || || ||| || ||||||| ||| || | Sbjct 1381539 T-GAGAGCGAGCGCGGTGCGGGGGGCTTTGGCTCCACGGGGACGCGCTGAGGGGCGAATT 1381481 Query 35898 CA 35899 || Sbjct 1381480 CA 1381479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149104122180000