Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1148 113 5e-20 seq9262 96.9 4e-15 >seq1148 Length=128528 Score = 113 bits (124), Expect = 5e-20 Identities = 76/84 (90%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--GCG 126323 ||||||||||||||||||||||||||| |||||||||| |||| | | ||| ||| ||| Sbjct 102195 GTCAGGTTGGCCGAGTGGTCTAAGGCGTCAGATTTAAGCTCTGATACTCTCAGGAGTGCG 102136 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||| Sbjct 102135 TGGGTTCGAACCCCACACCTGACA 102112 Score = 113 bits (124), Expect = 5e-20 Identities = 76/84 (90%), Gaps = 2/84 (2%) Strand=Plus/Minus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGA--GCG 126323 ||||||||||||||||||||||||||| |||||||||| |||| | | ||| ||| ||| Sbjct 119517 GTCAGGTTGGCCGAGTGGTCTAAGGCGTCAGATTTAAGCTCTGATACTCTCAGGAGTGCG 119458 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||||||||| Sbjct 119457 TGGGTTCGAACCCCACACCTGACA 119434 >seq9262 Length=60696 Score = 96.9 bits (106), Expect = 4e-15 Identities = 73/85 (86%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGT--TCCCTCGGGAGC 126322 |||||||||||||||||||||||||||| |||||||||| |||| | || | | || Sbjct 18049 AGTCAGGTTGGCCGAGTGGTCTAAGGCGTCAGATTTAAGCTCTGATACTCGTAAGAGTGC 18108 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||||| |||||| Sbjct 18109 GTGGGTTCGAACCCCACATCTGACA 18133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556735506320000