Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_009760.1 Length=218948 Score E Sequences producing significant alignments: (Bits) Value seq13903 89.7 7e-13 >seq13903 Length=213627 Score = 89.7 bits (98), Expect = 7e-13 Identities = 172/250 (69%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 158357 ATGATGGCGTTACCTGCGGTTACAATCGTATTGGTAGAACGATAATTCTGCTCTAGCTTC 158416 |||||| |||| | || |||||| |||||||||||||||||||| ||||| || Sbjct 110040 ATGATGTCGTTGGCCGCTTGTACAATGGTATTGGTAGAACGATAATTTTGCTCAAGTGGA 109981 Query 158417 ACGACCTTCGTACCCGGATAATCTTTTTGGAAGTTGAGTATCTTCTCAATGTTCGCTCCA 158476 | ||||| | | | |||||||||||| ||||| ||||| || | ||||| ||||| Sbjct 109980 AAAACCTTTACATCTGTATAATCTTTTTGAAAGTTTAGTATGTTTTTGATGTTAGCTCCC 109921 Query 158477 CGCCACCCGTATATGCCTTGATAATCATCGCCAACGACAAATATGTTATTCTTATC--GC 158534 | | || || || | || ||||| || || | | ||||| ||| ||| | Sbjct 109920 CTAAAACCATAAATACTCTGGGCGTCATCTCCTACAATGCAAATGTT-TTCGAATCTTGA 109862 Query 158535 CGACAATGTTTTTAATCATACGGTACTGACATTCATTCGTATCTTGATACTCATCACACA 158594 | ||| | |||| | ||| | || || | | || |||||||| |||||||| || Sbjct 109861 AGCCAAGGCTTTT-ACAATAAGATATTGGCTGTGGTTGGTATCTTGGTACTCATCCACCA 109803 Query 158595 TAATATACTT 158604 |||| || || Sbjct 109802 TAATGTATTT 109793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700347986240000