Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_011271.1 Length=155372 Score E Sequences producing significant alignments: (Bits) Value seq13448 98.7 1e-15 >seq13448 Length=225520 Score = 98.7 bits (108), Expect = 1e-15 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 116076 ACCTACGGCATCCTGGTCTACCAGGAGCAGCTGATCCGCACCGCCAAGGAGCTGGCCGGG 116135 |||||||||||| |||||||||| |||||| |||| | |||||| ||| ||||| ||| Sbjct 20399 ACCTACGGCATCATGGTCTACCAAGAGCAGGTGATGCAGACCGCCCAGGTGCTGGGCGGC 20340 Query 116136 TTCACCCCGGGCGAGGCCGAGCGGCTGCGTAAGGGCATCGGCAAGAAGAAGATGGAG 116192 | || || ||||| ||||| |||||| || ||| |||||||||||| |||| Sbjct 20339 TACAGCCTGGGCGGCGCCGACATGCTGCGCCGGGCCATGGGCAAGAAGAAGGCGGAG 20283 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 115023 GGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTCG 115082 || |||||||| ||||| | | ||||||||||| |||| | || |||||| Sbjct 21374 GGGCCGGGCCGAGGCTCGGGTGCAGGCTCGCTGGTGGCCTATGCGCTGCTGATCACCGAC 21315 Query 115083 ATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGCCCCGAC 115142 | |||||| | ||||| ||||| |||||||||||||| | |||||||| || | Sbjct 21314 CTGGACCCGCTGCAGTACAACCTGCTGTTCGAGCGCTTCTTGAACCCGGAGCGGGTGTCC 21255 Query 115143 TTCCCCGACATCGACGTCGACTTC 115166 | |||||| ||||| |||||||| Sbjct 21254 ATGCCCGACTTCGACATCGACTTC 21231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496950560960000