Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq4413 98.7 8e-16 >seq4413 Length=116149 Score = 98.7 bits (108), Expect = 8e-16 Identities = 132/180 (73%), Gaps = 4/180 (2%) Strand=Plus/Plus Query 108772 GCCCTCACCCTCAACTTTACGTGGCTGGTCAATTCGGCGGCGCACATGTACGGCGACCGT 108831 ||| ||||| || || | || ||| |||| || | ||| ||| | |||||| || | Sbjct 89600 GCCATCACCTTCCACGTGACCTGGTGCATCAACTCCGTGGCCCACCTCTACGGCTACAGG 89659 Query 108832 CCGTTCGACAAGAACATTTTC--CCAAGAGAAAACAAATTGGTGGCGGCGTTGGCTCTCG 108889 || | |||||||||| | | | ||| ||||| || ||| || | ||||| |||| Sbjct 89660 CCCTACGACAAGAACCTCTACGCCCACGAGAAC-CAGATTCTAGGAC-CTTTGGCCCTCG 89717 Query 108890 GCGAGGGATGGCACAACTACCACCACGTGTTCCCCTACGACTACAAGGCCGCCGAGTTGG 108949 | ||||||||||||||||||||||||| |||||| ||||||| |||| |||| ||| Sbjct 89718 GTGAGGGATGGCACAACTACCACCACGCCTTCCCCAGGGACTACAGGGCCAGCGAGATGG 89777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381689048592000