Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq1 150 7e-32 >seq1 Length=2207822 Score = 150 bits (166), Expect = 7e-32 Identities = 231/328 (70%), Gaps = 1/328 (0%) Strand=Plus/Plus Query 9100 AGGAGCCCAGCATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACC 9159 |||||| | ||||||||||||||||||||||||| || ||||||| || || ||||| Sbjct 253186 AGGAGCGCC-CATGGCATCCGTCAACAAAGTCATCATCCTCGGCAACCTGGGGCGCGACC 253244 Query 9160 CGGAAACCCGCTACCTCCCGAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCG 9219 | ||| |||||| ||| | ||||| || | | |||| | || | || || ||| Sbjct 253245 CCGAAGTGCGCTACACCCCCAACGGCGCAGCCGTGTGCAATCTGCGCATTGCCACCACCC 253304 Query 9220 ATCGCTACAAGGACAAGGCGAGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCG 9279 | || ||| | | ||||||||| | | |||| ||||| ||||| || | Sbjct 253305 GTAACTGGAAGAGCCGCGACAGCGGCGAGCGCCAAGAAGAAACCGAATGGCATTCGGTGG 253364 Query 9280 CTTTCTTCGGCCGCCTCGCCGAGATCGTCGACGAGCACCTTCGCAAGGGCGCATCGGTCT 9339 | | | ||||| |||||||||| | ||| |||| |||||| |||||| Sbjct 253365 TCATGTATGACCGCCAAGCCGAGATCGCAGGCGAATACCTCAAGAAGGGCCGCCCGGTCT 253424 Query 9340 ACATCGAGGGGCGCATCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACA 9399 | |||||||| ||| | ||||| || ||||||||||| || |||| | || ||||||| Sbjct 253425 ATATCGAGGGCCGCCTGAAGACCCGTAAGTGGCAGGACAAAGACGGCAACGACCGCTACA 253484 Query 9400 CGACCGAGATCGTCGCCGACAGGATGCA 9427 | ||||| ||||| |||||| ||||| Sbjct 253485 CCACCGAAATCGTTGCCGACTCCATGCA 253512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200519201448000