Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq13448 87.8 2e-12 >seq13448 Length=225520 Score = 87.8 bits (96), Expect = 2e-12 Identities = 70/82 (85%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 31291 GCGGAGAGGGTGGGATTCGAACCCACGG-AGGCTTTCACCT-CGCTAGTTTTCAAGACTA 31348 ||||| |||| ||||||||| ||||| | | |||| ||| |||||||||||||||||| Sbjct 108826 GCGGAAGCGGTGAGATTCGAACTCACGGTAAGGTTTCCCCTACGCTAGTTTTCAAGACTA 108885 Query 31349 GAGCCTTCAACCACTCGACCAC 31370 ||||||| ||||||||| |||| Sbjct 108886 GAGCCTTAAACCACTCGGCCAC 108907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 621984821920000