Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_014461.1 Length=73453 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 4e-11 >seq1 Length=2207822 Score = 82.4 bits (90), Expect = 4e-11 Identities = 68/81 (84%), Gaps = 4/81 (5%) Strand=Plus/Minus Query 61289 AGCGGCCTTTGCC---TCGTTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGT 61345 ||||| ||| ||| |||||||||||||||||||||| || |||| |||||| || ||| Sbjct 1918872 AGCGGGCTT-GCCGGGTCGTTAGCTCAGTTGGTAGAGCAGCGGACTTTTAATCCGTTGGT 1918814 Query 61346 CGCAGGTTCAAATCCTGCACG 61366 ||||||||| | ||| ||||| Sbjct 1918813 CGCAGGTTCGAGTCCCGCACG 1918793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 234873263372000