Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_014636.1 Length=225268 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 3e-12 >seq1 Length=2207822 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 191861 TTGGTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACC 191920 |||||| | |||| ||||||||||| ||||| ||||||||||||||| ||||||||| Sbjct 1918784 TTGGTGGGTCGTGCGGGACTCGAACCTGCGACCAACGGATTAAAAGTCCGCTGCTCTACC 1918843 Query 191921 AACTAAGCTAACG 191933 |||| |||||||| Sbjct 1918844 AACTGAGCTAACG 1918856 Score = 84.2 bits (92), Expect = 3e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 191861 TTGGTGCGCCGTGATGGACTCGAACCATCGACCCTCGGATTAAAAGTCCGATGCTCTACC 191920 |||||| ||| ||| ||| ||||||| |||||| |||||||| |||||| ||||||||| Sbjct 1918594 TTGGTGGGCCCTGAAGGATTCGAACCTTCGACCAACGGATTAAGAGTCCGCTGCTCTACC 1918653 Query 191921 AACTAAGCTAA 191931 |||| |||||| Sbjct 1918654 AACTGAGCTAA 1918664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 720567435840000