Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq14944 102 1e-16 seq1448 96.9 4e-15 >seq14944 Length=2286 Score = 102 bits (112), Expect = 1e-16 Identities = 276/415 (67%), Gaps = 8/415 (2%) Strand=Plus/Minus Query 15839 GATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCGACC 15898 ||||| |||||| || || | ||| || | || | || || || ||||| || || Sbjct 764 GATCTGCTCGCGACCACGGATGTCTGGCAGCGTGACATAGACCTGGCGGTCAAATCGGCC 705 Query 15899 TGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGCGATGACAACAAT 15958 |||||| || | ||| || ||||| || ||| || || || || || || | | Sbjct 704 TGGGCGCAGCAAGGCGGGGTCCAGGATGTCCGGGCGGTTGGTGGCCGCCATCACGATGAC 645 Query 15959 ACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCG 16018 ||| | | | ||||| || |||||||| || | |||||| | || || || || Sbjct 644 ACCGAGGTTGGTCTCAAAGCCGTCCATCTCGACCAGCATCTGGTTGAGGGTCTGCTCGCG 585 Query 16019 TTCATCATTCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCA 16076 || ||||| | | ||| ||||||| || || || || || || || || Sbjct 584 CTCGTCATTGCCA--CCGCCCAGGCCAGCACCACGATGGCGACCGACAGCGTCGATTTCG 527 Query 16077 TCAATGAAGACGATGCATGGTT-GATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACG 16135 |||||||||| |||||| ||| | | ||| | || || || | || || ||||| Sbjct 526 TCAATGAAGATGATGCAGGGTGCGCTCTTCTTG-GCTTGCTCGAACATGTCGCGCACACG 468 Query 16136 CTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGG 16194 |||||||| ||||||||||||||||| |||| | | | | | || | || ||| | Sbjct 467 GGCTGCGCCCACGCCAACAAACATCTCCACGAAGTCAGAGCCCG-AGATGGTGAAGAAAG 409 Query 16195 GGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 | || || | ||||||||| || || ||| | || ||||||||||| || || Sbjct 408 GCACCTTGGCTTCACCCGCGATAGCCTTGGCCAACAGGGTCTTACCCGTGCCGGG 354 >seq1448 Length=175156 Score = 96.9 bits (106), Expect = 4e-15 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 102204 GTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGT 102263 || ||||| || |||||||| ||||| || | | |||| ||||| ||||||||||| Sbjct 97873 GTGGAGGGGATTTTCTTCTCGGGTTCTTTTGCCTCAATTTTCTGGCTGAAGAAGCGAGGC 97814 Query 102264 CTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAA 102323 |||||||| ||||| || ||||||||| ||||| ||||||||||| || ||| Sbjct 97813 CTCATGCCGGGTCTGACTTTTAGCAACGAGCTCATCTCCCGTGACGAGGGCCTGCACACT 97754 Query 102324 GAGTTTGC 102331 || ||||| Sbjct 97753 GACTTTGC 97746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620602732960000