Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_015265.1 Length=37236 Score E Sequences producing significant alignments: (Bits) Value seq2224 122 2e-23 >seq2224 Length=1872321 Score = 122 bits (134), Expect = 2e-23 Identities = 354/530 (67%), Gaps = 20/530 (4%) Strand=Plus/Minus Query 9479 AGGCACGCTGGTGGATGCGACGATCTTCGAGGCTGCGCCG---TCCACGAAGAACGCCG- 9534 ||||||| ||||||| || || | | | | ||||| || || ||||||||| Sbjct 775164 AGGCACGGTGGTGGACGCCACACTGATTG---CCGCGCCAAGCTCGACCAAGAACGCCCA 775108 Query 9535 GGAAGAGCCGTGACCCGGAGATGCATCAGACGAAGAAGGGCAACGACTGGTATTTCGGCA 9594 || || | | | ||||||||| | | || ||||||||| | ||||| ||||||| Sbjct 775107 GGGCGAAC-GCAATCCGGAGATGAAGCCGAGCAAGAAGGGCGGTCAGTGGTACTTCGGCA 775049 Query 9595 TGAAGGCCCATGTCGGCGTCGACGCCGACTCGGGTCTGGTGCATAGCGTGGTCACCACGG 9654 ||||||| || | ||||| || || |||||||| |||||||| | ||| ||| | Sbjct 775048 TGAAGGCGCACATTGGCGTGGATGCTGACTCGGGACTGGTGCACACCGTTCGAGGCACCG 774989 Query 9655 CGGCCAACGAGCCGGACGTATCGCAGGCCCACGCCCTGCTGCACGGTCATGAGCAGGAAG 9714 | | || || | || || | ||||| |||| ||||||||||| | ||| | | Sbjct 774988 CTGGCAGCGTCCATGATGTGACCGAGGCCAACGCACTGCTGCACGGCGAGGAGACAGTGG 774929 Query 9715 CGTTTGGCGATGCGGGCTACACCGGCGTGGACAAGCGCGAGGAGATGAAGGGCAAGACGG 9774 | |||||||||||||||||| || |||| ||||||| || || | || | || Sbjct 774928 CATTTGGCGATGCGGGCTACCAGGGTGTGGCCAAGCGCCCTGATGCCAA-GTCAGG--GG 774872 Query 9775 TGAAGTGGCACGTGGCGCTCAAGCGCGGAAAGATCAGGGCGATGCAGGAAGGTCCGCTGA 9834 | | ||| || | ||| | || || ||| | ||||| || | ||| || || Sbjct 774871 TCGACTGGAACATCGCGATGCGGCCGGGCAAGCGCCGGGCGCTGGA-CAAGAGCC-AAGA 774814 Query 9835 AG-GA-CCTCGTGAT---CGCGGTCGAGCGAACCAAGGCGCAG-ATCCGCGCCCGGGTCG 9888 || || | | |||| || ||| ||| | |||||| ||| ||| | ||| ||| | Sbjct 774813 AGTGAGTCGCTTGATCGACGAGGTGGAGATACTCAAGGC-CAGCATCAGAGCCAAGGTGG 774755 Query 9889 AGCATCCGTTTCATGTCGTGAAGAACCTGTTTCGTCATCGCAAGGTGCGCTACAAGGGTC 9948 |||| ||||| | || | ||| | |||| | || ||||||||||| || | Sbjct 774754 AGCACCCGTTCCGCGTGATCAAGCGGCGGTTTGGGCACATGAAGGTGCGCTATCGCGGGC 774695 Query 9949 TAGCCAGGAACACGGCACAGCTGTTCAGTCTGTTCGCGCTGGCGAACCTG 9998 | | | ||||||||| || ||| || ||||||||||| | |||||| Sbjct 774694 TGGGGAAGAACACGGCGCAACTGCACACGCTGTTCGCGCTATCCAACCTG 774645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119008156568000