Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq1447 116 4e-21 >seq1447 Length=1029730 Score = 116 bits (128), Expect = 4e-21 Identities = 175/246 (71%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 154869 TGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATA 154928 ||| | ||| |||| || ||||| || ||||||| ||||| | |||| | | || Sbjct 592352 TGTTTGATGGTTACTTATCCATCGACTTATGGTGTTTTTGATGAAGAAATTAAAGAAGTA 592293 Query 154929 TGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCA 154988 | || |||| | ||||| || ||||| ||| | || || || || | ||||| Sbjct 592292 ACCGAACTCATTCACCAAAATGGAGGACAGGTTTATATGGACGGCGCCAACATGAATGCC 592233 Query 154989 CAGGTAGGACTAGCAAAACCATGTGAGTAT-GGTGCAGATGTATGTCATCTAAACTTACA 155047 || ||||| || | || || || | || || |||||||| ||||| |||||||| || Sbjct 592232 CAAGTAGGCCTTACCAATCC-TGCCAACATTGGGGCAGATGTTTGTCACCTAAACTTGCA 592174 Query 155048 TAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGC 155107 ||||| || ||||| ||||||||||||||||| || || |||||||| |||| || Sbjct 592173 CAAAACCTTTGCGATTCCTCATGGAGGTGGAGGTCCAGGAGTTGGTCCTATTTGTGTTGC 592114 Query 155108 AAAACA 155113 ||||| Sbjct 592113 CAAACA 592108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579082477120000