Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq2224 122 3e-23 >seq2224 Length=1872321 Score = 122 bits (134), Expect = 3e-23 Identities = 220/319 (69%), Gaps = 7/319 (2%) Strand=Plus/Minus Query 24831 AGCTGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATCGCG 24890 || ||||||||||||||||||||||| || | || | |||||||| ||||| || || Sbjct 1212255 AGTTGCCAGCTCTACCAGCGCAGCGCCGATATCTTTTTGGGCGTGCCCTTCAACATTGCC 1212196 Query 24891 AGCTACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGGTCGGCGAATTC 24950 ||||||||| |||||||||| | | || | ||| || || | || || || ||| Sbjct 1212195 AGCTACGCGTTGCTGACCCACATGCTGGCCCAGCAGTGCGACTTGGACGTGGGTGATTTC 1212136 Query 24951 ATCTGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCA--GGCGACCGAAC 25008 |||||||| ||||||||| |||||| || | || ||| ||||||| || | || | Sbjct 1212135 ATCTGGACGGGCGGCGACTGCCACCTCTACACCAATCACTTCGAGCAAGTGCAAACG--C 1212078 Query 25009 AACTGTCGCGCACGCACACGGGCTATCCGTGGCTGGCGCTGAATC---ACCGCGACTCGA 25065 | || ||||||||| | | ||| ||| |||| | || | | | || || | Sbjct 1212077 AGCTAGCGCGCACGCCCTTTGCCTACCCGGTGCTGAACATCAAGCGCAAGCCCGCGTCCA 1212018 Query 25066 TCTTCGAGTACACCGCCGACGACGTCATATTCCTCGGCTACCGGCCGCACCCGGTCATCA 25125 ||||||| ||| ||| ||| | | || | |||| || || || ||||| Sbjct 1212017 TCTTCGACTACGAGTTCGAAGACTTTGAGGTGCTGGAGTACCAGCACCATGCGCCCATCA 1211958 Query 25126 AGGCCCCCGTGGCCGTGTA 25144 |||| || ||||| ||||| Sbjct 1211957 AGGCACCGGTGGCGGTGTA 1211939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164137708064000