Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq2224 114 4e-21 >seq2224 Length=1872321 Score = 114 bits (126), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 5/206 (2%) Strand=Plus/Plus Query 21313 CCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACC 21372 ||| ||||| | |||||| ||||||||||| | || ||||| ||||||| || Sbjct 1509523 CCCTGTGATTGCGCTGTCTCAGCTCAACCGAAGTGTTGAAACTCGGCCTGACAAGCGGCC 1509582 Query 21373 GATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTT 21432 |||||| |||||||| ||||| || || |||||||||||||| || ||||||||||| Sbjct 1509583 CATGATGAGCGACCTGCGGGAGTCGGGCGCTATCGAGCAGGACGCGGACGTGATCATGTT 1509642 Query 21433 CGTGTACCGCGACGAGGTCTACCACCCGGA----TACCCAGTACCGCGGCGTGGCTGAGT 21488 | | || ||||| || |||| ||| || | | ||| ||| ||| ||| || Sbjct 1509643 CATCTATCGCGATGACTACTACAACCGCGAGAACTCCAAAGTGCCG-GGCACGGCCGAAA 1509701 Query 21489 TGATCATCGCGAAGCACCGCAACGGC 21514 | ||||||| ||||| || |||||| Sbjct 1509702 TCATCATCGGCAAGCAGCGTAACGGC 1509727 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157076817652000