Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_016765.1 Length=54024 Score E Sequences producing significant alignments: (Bits) Value seq2224 98.7 3e-16 >seq2224 Length=1872321 Score = 98.7 bits (108), Expect = 3e-16 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 45524 TGTCCTGTGCTTCCCCTCTGCCAGCTCAACCGAGGTTGCGAGTCTCGCCCCGACAAGCGT 45583 || |||||| || | || | |||||||||||| || || |||| || |||||||| Sbjct 1509521 TGCCCTGTGATTGCGCTGTCTCAGCTCAACCGAAGTGTTGAAACTCGGCCTGACAAGCGG 1509580 Query 45584 CCGGTCCTCAGCGACCTGCGCGAGTCCGGCGCCATTGAGCAAGACGCCGACATCGTCATG 45643 || | | ||||||||||| ||||| ||||| || ||||| ||||| ||| | ||||| Sbjct 1509581 CCCATGATGAGCGACCTGCGGGAGTCGGGCGCTATCGAGCAGGACGCGGACGTGATCATG 1509640 Query 45644 TTCGTGTACCGCGATGA 45660 ||| | || |||||||| Sbjct 1509641 TTCATCTATCGCGATGA 1509657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 172718273576000