Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_016770.1 Length=47159 Score E Sequences producing significant alignments: (Bits) Value seq11737 96.9 1e-15 >seq11737 Length=277544 Score = 96.9 bits (106), Expect = 1e-15 Identities = 126/174 (72%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 3481 ATAAGACGCAATGTTGAAAGGAACGCCTAAAAATAGGTCTGCACTTCTTTGATACAGTTT 3540 |||||| |||||||| || |||||||| ||||| |||||||||||||| || || | Sbjct 158650 ATAAGAAGCAATGTTAAAGGGAACGCCCAAAAAGGTATCTGCACTTCTTTGGTAGAGCTG 158591 Query 3541 CAAATCCAAATAACCGGACTCAGACACATAGAACTGAAAAAAGCAGTGGCACGGAGGAAG 3600 | || | || || | |||||| |||||||| ||||||||||| |||| || Sbjct 158590 TAGCGATAATTTTCCA---TCGGCCACATAAAACTGAAACAAGCAGTGGCAAGGAGCCAG 158534 Query 3601 TGCCATCATGTGTATTTCTCCAACATTCCAAGCACTAACAATTAACCTTCTTGA 3654 |||||| | ||||| | ||||||||||| |||||| | ||||| || Sbjct 158533 TGCCATTTGATCTATTTGCGCCACATTCCAAGCCGAAACAATGAGTCTTCTAGA 158480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150754969236000