Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq1 109 1e-18 >seq1 Length=2207822 Score = 109 bits (120), Expect = 1e-18 Identities = 123/162 (76%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 22987 TCAAAGAACAGAATTTGTGCGCAACCTTCGCCAGCGTAGATCAGTGCCGGGCT-TGGTGT 23045 ||||| ||||| | || || || |||||||| ||||| ||| || ||||| ||| || Sbjct 1900025 TCAAAAAACAGCACCTGGGCACAGCCTTCGCCTGCGTAAATCT-TGGCGGGCAGTGGGGT 1900083 Query 23046 GGTATTGGAAAACTCCAGAGTAAGCGAGCCTTTCCATTCTGGTTCCAGCGGCGTGACGTT 23105 ||| || || |||||||| || | |||| | ||| || || || | ||| |||||||| Sbjct 1900084 GGTGTTAGAGAACTCCAGCGTCACATAGCCCTCCCACTCGGGCTCAAACGGGGTGACGTT 1900143 Query 23106 TACGATGATGCCGCAACGCGCATACGTCGATTTGCCGAGGCA 23147 |||||||||||||| |||||||| || ||||| ||||| Sbjct 1900144 GACGATGATGCCGCAGCGCGCATAGGTACTCTTGCCCAGGCA 1900185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897391641440000