Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq1 149 2e-31 >seq1 Length=2207822 Score = 149 bits (164), Expect = 2e-31 Identities = 227/322 (70%), Gaps = 1/322 (0%) Strand=Plus/Plus Query 9950 TCAAGGAGCTCGACATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCG 10009 || |||||| | ||||||||||||||||||||||||| || ||||||| || || || Sbjct 253183 TCCAGGAGCGCC-CATGGCATCCGTCAACAAAGTCATCATCCTCGGCAACCTGGGGCGCG 253241 Query 10010 ACCCGGAAACCCGCTACCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGA 10069 |||| ||| |||||| ||| | ||||| || | | ||| | ||| | || || | Sbjct 253242 ACCCCGAAGTGCGCTACACCCCCAACGGCGCAGCCGTGTGCAATCTGCGCATTGCCACCA 253301 Query 10070 CCGATCGCTACAAGGACAAGGCGAGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCG 10129 || | || ||| | | ||||||||| | ||| ||||||||||| | Sbjct 253302 CCCGTAACTGGAAGAGCCGCGACAGCGGCGAGCGCCAAGAAGAAACCGAATGGCATTCGG 253361 Query 10130 TCAGCTTCTTCGGCCGCCTCGCCGAGATCGTCGACGAGTACCTGCGCAAGGGCGCGCCGG 10189 | | | | | ||||| |||||||||| | ||| ||||| |||||| |||| Sbjct 253362 TGGTCATGTATGACCGCCAAGCCGAGATCGCAGGCGAATACCTCAAGAAGGGCCGCCCGG 253421 Query 10190 TCTACATCGAGGGCCGCATCCGCACGCGGAAGTGGCAGGATAACGCCGGCCAGGATCGCT 10249 |||| |||||||||||| | || || ||||||||||| || | |||| | || |||| Sbjct 253422 TCTATATCGAGGGCCGCCTGAAGACCCGTAAGTGGCAGGACAAAGACGGCAACGACCGCT 253481 Query 10250 ACACGACCGAGATCGTCGCCGA 10271 |||| ||||| ||||| ||||| Sbjct 253482 ACACCACCGAAATCGTTGCCGA 253503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197746522644000