Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq2224 376 3e-99 >seq2224 Length=1872321 Score = 376 bits (416), Expect = 3e-99 Identities = 722/1043 (69%), Gaps = 35/1043 (3%) Strand=Plus/Plus Query 135400 TGGCCTAGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCT 135459 || |||| ||||||||||| | || |||||||| || || || | ||||| | ||||| Sbjct 868983 TGTCCTACCCCTTCACGCACACCACCTGCTTGAGTGTATGCACCACCTCCACCAAGTCCT 869042 Query 135460 TCTGGGCCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGC 135519 ||| ||| |||| |||||||||||||| ||||||||||| |||||||||||||||||| Sbjct 869043 GCTGCGCCGCCATCACCGCGTCGATGTCTTTGTAGGCCATGGGGATTTCGTCGATCACGG 869102 Query 135520 CAGCGTCCTTACGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGTGAAGG 135579 | |||| || ||||| ||||| || | ||||| | ||| ||||| |||| |||||| Sbjct 869103 CTTCGTCTTTGCGGCATTCCACACCGGCCGTGGCTTGGATGTGGTCGTCCACGGTGAACA 869162 Query 135580 TCGCCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCA-CGAGCAGAAC 135638 || |||||||| ||| || |||| |||||||||||||| ||| | || || Sbjct 869163 TCTTCTTGGCCTTGGTGCGGCTCATCACGCGGCCCGCGCCGTGGCTGCAGCTCTCA-AAG 869221 Query 135639 GAGTCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATG 135698 |||| |||||| |||||||||||||||| || ||||| ||| |||||| Sbjct 869222 CTTTCCGGGTTGCCCAGGCCGCGCACGATGTAGCTGCGCGCGCCCATGCTGCCCGGGATG 869281 Query 135699 ATCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCG 135758 || || | || | |||||| || |||||||||||||||||||||||| || || Sbjct 869282 ATGCCCAGCTCGCCCTTCTTAGCGCTCACCGCGCCCTTGCGGGTCACGAACACGTCTTCA 869341 Query 135759 TCGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTC 135818 | |||||| || | ||| || ||||||||||||||||||||||| || ||| || | Sbjct 869342 CCAAAGTGGCGCTCTTGCTGCACATAGTTGTGGTGGCAGTTCACCGCCTCGATGTGCGAC 869401 Query 135819 TTGAACG----GCGGCAGGCCCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCAT 135874 | |||| | | | || | ||| || ||| | | || | ||||||||| Sbjct 869402 TCAAACGGTTTGGTGATGACCTGTCGCACG-GTGG---CAATGAGGTTGGCCATCATCAC 869457 Query 135875 CTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAA 135934 |||||||| | |||| || | ||| |||| | || || ||| |||||| || Sbjct 869458 TTCGCGGTTACGCTGCGCAAACTTCTGCGCCCAACCCACCGCGCGCACATAGTCGCCAAA 869517 Query 135935 CTCCGGTTCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGCGGCTTGCGCCCGTCACG 135994 | | | | || || || | || | ||| | || || | ||||| || || Sbjct 869518 GTACTGCGCCCCCTCTTCGAAGTAGGCCAAGTCTTCATCGGGCAGGTTGCGTTGGTTGCG 869577 Query 135995 CCGCAGCATCATCTCCTTGGCCTTCTCGATGAAGATACG-GCCGATGGTGTTGCCGACGC 136053 | | || || || ||||||| ||||||||| || | |||||||| ||||| || | Sbjct 869578 -CTCGGCGTC--CTTCTTGGCCAGCTCGATGAA-ATGGGTGCCGATGGCATTGCCCACCC 869633 Query 136054 CGCGCGAGCCCGAGTGGAGCATCACCCAGACGCGCTGGTCCTCGTCGAGGCAGACCTCGA 136113 | ||||| || ||||| ||||| | ||| || | | |||||| |||||||| |||| Sbjct 869634 CACGCGAACCGGAGTGCAGCATGAACCACACCGCCCCTTGCTCGTCCAGGCAGACTTCGA 869693 Query 136114 TGAAGTGGTTGCCGCCGCCCAGGGTGCCCAGTTGGACCACGCTGTTGGCGTTCTTCAGCG 136173 |||||||||| || |||| |||||||| || | |||||| ||||||||| Sbjct 869694 TGAAGTGGTTACCCGTCCCCAAAGTGCCCAGGTGTTTGCGGTTGTTGGTGTTCTTCAGGC 869753 Query 136174 CCGGGTACTTCTCGCAGAGCTTGTCGAACCGCGCCTCCAGGCCCGAGTCGACCCA---CT 136230 ||||| | |||||| ||| |||||| | | || ||| | || | |||| || Sbjct 869754 GCGGGTGCAGCTCGCACAGCGCGTCGAA---CTCATC--AGCCAGCGT-GGCCCAGATCT 869807 Query 136231 --TGCGCAGGATCGAGTTGGGGATGCC-GCTGCGCCCGTTCCAGCCGCCCGACGGACCCG 136287 | | | | ||| || || | || ||||| || | || ||| |||| | || Sbjct 869808 GGTCCACCGTGTCGGGTGGGTTCTCCCAGCTGCCGGGGTCACGGC--CCCCACGG-CGCG 869864 Query 136288 GC---CCGCCGTGCGGGACGGCGTGCTCGATCAGCGAGCGAAGCTTGGAC-AGGCTGTCG 136343 || ||||||||| ||||| | ||| || || || || | || | | | ||||| Sbjct 869865 GCGAGAAGCCGTGCGGCACGGCCTTCTCAATGGCCGCACGCAG-TGGGCCTAAGTTGTCG 869923 Query 136344 GGAAGGTCCGACGCGGTCAGGCTGGTGCGGACCGCCATCATGCCGCAGCCGATGTCGACG 136403 || ||||| ||| || | |||| | |||||||||| |||||||| ||||| || Sbjct 869924 GGCAGGTCTTCAGCGCGCAAGGTGGTCTTGGCCGCCATCATTCCGCAGCCAATGTCTACT 869983 Query 136404 CCGACGGCGGCCGGGATGATCGC 136426 || || || ||||||||||| || Sbjct 869984 CCCACCGCCGCCGGGATGATGGC 870006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700287199920000