Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_019511.1 Length=136326 Score E Sequences producing significant alignments: (Bits) Value seq13903 82.4 7e-11 >seq13903 Length=213627 Score = 82.4 bits (90), Expect = 7e-11 Identities = 185/278 (67%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 57475 ACACAAATTTGAGTTATTAATAGTCAATCCTTTGTCTTTATATACATCTACTGTATTACT 57534 |||||||||||||||| || |||| | ||||||||| || || ||| | | || | Sbjct 211390 ACACAAATTTGAGTTAAAGATGGTCATGCGTTTGTCTTTGTAAACCTCTGGTTTGTTGTT 211331 Query 57535 ATTTGCATTATCATGAAAGAAGATATAGGGGTATCCTATTTGTGTTCTTCTTGTTAATAC 57594 ||| | | || | ||| | ||| || || |||| ||| | ||| | | || || Sbjct 211330 GTTTACCGTGTCTTTAAACATGATGTAAGGAAGTCCTTTTTCTTGTCTGCATTGCAAAAC 211271 Query 57595 TTTAGCCCATGtttttcttttttctttGTCCCCATTAATCATGTCTAATAACCAATCATC 57654 ||| ||||| | |||||| ||| | || ||| |||||| ||| | ||| | || Sbjct 211270 TTTTGCCCAAACCTCTCTTTTATCTGTATCACCACCAATCATTTCTTCCATCCATTGGTC 211211 Query 57655 AGTAACTGTTACCGCATGTGTTAAGTTTTGAATTGGATTACCTTCGGTACCAATCTCTAA 57714 || || |||||| ||| |||||||| || || || || | || || || Sbjct 211210 AGATACAGTTACCCCATAAAACAAGTTTTGGATGGGGTTTCCAATGTCTTTGATTTCCAA 211151 Query 57715 AAACTCGTCAATATCTTTGTGTTCTATAGGTAGATAAG 57752 |||||| |||||| | ||| ||||| |||||||| Sbjct 211150 AAACTCTCTAATATCCTCGTGCTCTATGTCTAGATAAG 211113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 436017074080000