Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_019521.1 Length=219372 Score E Sequences producing significant alignments: (Bits) Value seq14507 96.9 5e-15 >seq14507 Length=2780 Score = 96.9 bits (106), Expect = 5e-15 Identities = 385/598 (64%), Gaps = 16/598 (3%) Strand=Plus/Plus Query 139433 AATAGAAAAGGAATTATTTTAGCAGGTGGGTCTGGGACCCGCTTGCATCCATTGACTATC 139492 |||| ||||| |||||| | |||||||| ||| ||| | |||| || || || | Sbjct 5 AATATGAAAGGTATTATTCTTGCAGGTGGTAGTGGTACCAGACTGCACCCCTTAACATTG 64 Query 139493 AGTGTTTCGAAACAGTTATTACCTGTATACGATAAACCAATGATTTACTATCCATTGACA 139552 || || ||| | | ||||| ||||| ||||| ||||| ||||||||||| | Sbjct 65 GCCGTAAGCAAGCAGCTCATGCCTGTTTACGACAAACCCATGATCTACTATCCATTATCT 124 Query 139553 ACTCTTATCGAAGCTGGTATAAACGAAATACTTATAATATCAACACCACAGGATAGAAAT 139612 | ||| || || ||||| || || | | || || || || || || ||| Sbjct 125 ATTCTGATGTTGGCGGGTATCAAAGAGGTTTTGATTATTTCTACTCCTCACGATTTGCCA 184 Query 139613 TCTTTCGAGAACTTACTAGGTAACGGTTCACAATTTGGTGTTAGAATAGAATACGCTGTT 139672 |||| | || ||| | || | || |||||| | ||| || | ||||| || | Sbjct 185 CATTTCAAAAAATTATTGGGCGATGGATCACAAATAGGTTGTAAGTTTGAATATGCCGAA 244 Query 139673 CAAGAAAAACCTAATGGTTTAGCACAAGCTTTCGTTATCGGTGAAGAATTCATAGGTAAA 139732 || | ||| || ||||| || || ||||| || || || || || ||||| || | Sbjct 245 CAGCCACTACCCAACGGTTTGGCTCAGGCTTTTGTGATAGGCGAGGAGTTCATTGGAGAT 304 Query 139733 TCTAAAGTAGCTCTGATTTTAGGTGACAACATTTTCCATGCT-----TCTAATATAGATA 139787 ||| || || || | | || || || ||||| ||| ||| | || || Sbjct 305 GATAAGGTGGCCTTGGTACTTGGCGATAATATTTTTTATGGAAGCGGTCTCAG-TAAATT 363 Query 139788 GATTACT-TATGGAAGCTAATATGTCTGATAAAAATACGATATTTGCATATCGTGTAAAT 139846 | |||| | | | ||| | |||| || | | ||||| |||| ||| | Sbjct 364 G-TTACAATCTTGT-GCTGACC---CTGAGGGCGGTATGGTGTTTGCGTATCCAGTACAA 418 Query 139847 GATCCTCAGAGATATGGTGTAGTTGAATTCGATGAATATGATAACGCTGTTTCGATCGAA 139906 || ||| || ||||||| || || || ||||||||| || ||| || | || ||| Sbjct 419 GACCCTGAGCGATATGGCGTGGTAGAGTTCGATGAAGATTTTAATGCCCTCAGCATTGAA 478 Query 139907 GAAAAACCTTTGAA--TCCTAAATCTAATTACGCAGTACCAGGCTTATATTTCTATAATA 139964 |||||||| ||| ||||||| |||||| || || || || |||||||||||| | | Sbjct 479 GAAAAACC--CGAATCTCCTAAAAGTAATTATGCTGTGCCGGGATTATATTTCTATGACA 536 Query 139965 ACGATGTTATCGAAGTAGCTAAGACTATCAAACCTTCAGCTCGTGGAGAATACGAAAT 140022 | || || | ||| |||| || | || || || | | || ||||||||||| Sbjct 537 ATGAAGTAGTAGAAATAGCCAAAAACATTGCTCCATCGCCGAGAGGTGAATACGAAAT 594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701704480960000