Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq11737 96.9 1e-15 >seq11737 Length=277544 Score = 96.9 bits (106), Expect = 1e-15 Identities = 150/209 (72%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 45524 TTCGGCCGTCAGCTGCGCTTTAA-CTTGCAGGACGGATTCCCGCTCGTGACGACGAAAAA 45582 || || | ||| |||||||| | || ||| | || |||||||| || || || ||||| Sbjct 158195 TTTGGACATCAAATGCGCTTTGATCTCTCAGAA-GGCTTCCCGCTTGTTACCACCAAAAA 158253 Query 45583 GTTGCATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAATGT 45642 | ||| | | ||||| ||| ||||| | ||||||||||| || || || ||| Sbjct 158254 ATGCCATTTAAGATCGATTATTGTAGAACTTTTGTGGTTTTTAAAGGGTGAAACCAAT-A 158312 Query 45643 TCGC-TATTTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGCG 45701 |||| ||| | | || || |||| ||||||||||| ||||| |||||||| || | Sbjct 158313 TCGCTTATCTCAAAGAAAACAAGGTGAGCATTTGGGACGAATGGGCGGATGAAAATGGGG 158372 Query 45702 ATCTCGGCCCAATCTACGGCGCGCAATGG 45730 |||| || ||| | ||||| || || ||| Sbjct 158373 ATCTGGGTCCAGTTTACGGTGCCCAGTGG 158401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157716680852000