Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq1 149 3e-31 >seq1 Length=2207822 Score = 149 bits (164), Expect = 3e-31 Identities = 233/331 (70%), Gaps = 7/331 (2%) Strand=Plus/Plus Query 9685 AGGAGCCCAGCATGGCATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGTGCCGACC 9744 |||||| | ||||||||||||||||||||||||| || ||||||| || || ||||| Sbjct 253186 AGGAGCGCC-CATGGCATCCGTCAACAAAGTCATCATCCTCGGCAACCTGGGGCGCGACC 253244 Query 9745 CGGAAACCCGCTATCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCGACGACCG 9804 | ||| ||||| ||| | ||||| || | | ||| | ||| | || || ||| Sbjct 253245 CCGAAGTGCGCTACACCCCCAACGGCGCAGCCGTGTGCAATCTGCGCATTGCCACCACC- 253303 Query 9805 ATCGTTAC---AAGGACAAAGCCAGCGGCGACTTCAAAGAAGTGACCGAGTGGCACCGCG 9861 ||| || ||| | | ||||||||| | |||||| ||||| ||||| | Sbjct 253304 --CGTAACTGGAAGAGCCGCGACAGCGGCGAGCGCCAAGAAGAAACCGAATGGCATTCGG 253361 Query 9862 TCGCCTTCTTCGGCCGCCTCGCCGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCGG 9921 | | | | | | ||||| |||||||||| | ||| |||| |||||| ||| Sbjct 253362 TGGTCATGTATGACCGCCAAGCCGAGATCGCAGGCGAATACCTCAAGAAGGGCCGCCCGG 253421 Query 9922 TCTACATCGAGGGGCGCATCAAAACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCT 9981 |||| |||||||| ||| | || || || ||||||||||| || |||| | || |||| Sbjct 253422 TCTATATCGAGGGCCGCCTGAAGACCCGTAAGTGGCAGGACAAAGACGGCAACGACCGCT 253481 Query 9982 ACACGACCGAGATCGTCGCCGACAAGATGCA 10012 |||| ||||| ||||| |||||| ||||| Sbjct 253482 ACACCACCGAAATCGTTGCCGACTCCATGCA 253512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201277435074000