Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq11737 123 4e-23 >seq11737 Length=277544 Score = 123 bits (136), Expect = 4e-23 Identities = 170/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 122410 CGAAAAAGCAGACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTT 122469 ||||||| ||||||| || ||| ||| ||||| | || || ||||||||||| Sbjct 158155 CGAAAAAACAGACCGAACAGGCGTGGGAACCCTCAGTATTTTTGGACATCAAATGCGCTT 158214 Query 122470 TGACCTGCAAAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCAT 122529 ||| || | |||| |||||||| || || |||||||| || | | || || || Sbjct 158215 TGATCTCTCAGAAGGCTTCCCGCTTGTTACCACCAAAAAATGCCATTTAAGATCGATTAT 158274 Query 122530 CCATGAGCTTCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAA 122589 || ||| ||||||| | | ||| || ||||| ||| ||||| ||||| ||||| Sbjct 158275 TGTAGAACTTTTGTGGTTTTTAAAGGGTGAAACCAATATCGCTTATCTCAAAGAAAACAA 158334 Query 122590 CGTCAGTATCTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGT 122647 || || || ||||| |||||||| |||||| |||| |||| || || || |||||| Sbjct 158335 GGTGAGCATTTGGGACGAATGGGCGGATGAAAATGGGGATCTGGGTCCAGTTTACGGT 158392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777457032800000