Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_020079.1 Length=147737 Score E Sequences producing significant alignments: (Bits) Value seq14507 96.9 3e-15 >seq14507 Length=2780 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 39254 ATGATTAAAATATCCTTAATGTCAGCCAACATCAATACCGATAAAGGGTAGTAGATCATG 39313 || || |||| || || || | |||||||||| | ||||| || |||||||||||| Sbjct 162 ATAATCAAAACCTCTTTGATACCCGCCAACATCAGAATAGATAATGGATAGTAGATCATG 103 Query 39314 GGTTTGTCATACACAGGGAGCAATTGCTTGCTCACACTGCGTGTTACCGGATGAAGGCGG 39373 |||||||| || ||||| | | |||||||| || ||||| || || || | | Sbjct 102 GGTTTGTCGTAAACAGGCATGAGCTGCTTGCTTACGGCCAATGTTAAGGGGTGCAGTCTG 43 Query 39374 GTTCCACTTCCTCCCGCCAAAATAATACCTTTCATA 39409 || ||||| || || || | |||||||||||||||| Sbjct 42 GTACCACTACCACCTGCAAGAATAATACCTTTCATA 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472524058160000