Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_020841.1 Length=40803 Score E Sequences producing significant alignments: (Bits) Value seq2224 98.7 3e-16 >seq2224 Length=1872321 Score = 98.7 bits (108), Expect = 3e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 13037 AAAGAGTTTAATTGTCCAGTTATCGCACTGTCACAGCTTAACCGTAGCTTAGAGAGCCGA 13096 || ||||| || || || || || || ||||| ||||| ||||| || | || | || Sbjct 1509509 AAGGAGTTGAACTGCCCTGTGATTGCGCTGTCTCAGCTCAACCGAAGTGTTGAAACTCGG 1509568 Query 13097 CCAAACAAACGGCCCATCATGAGCGACCTAAAAGAGTCAGGGGCCATTGAGGAAAACGCT 13156 || |||| |||||||| ||||||||||| ||||| || || || ||| | |||| Sbjct 1509569 CCTGACAAGCGGCCCATGATGAGCGACCTGCGGGAGTCGGGCGCTATCGAGCAGGACGCG 1509628 Query 13157 GACGTGATTATGTTCCTGTACCGCGATGA 13185 |||||||| |||||| | || |||||||| Sbjct 1509629 GACGTGATCATGTTCATCTATCGCGATGA 1509657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130420116740000