Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq14944 95.1 1e-14 >seq14944 Length=2286 Score = 95.1 bits (104), Expect = 1e-14 Identities = 274/416 (66%), Gaps = 12/416 (3%) Strand=Plus/Plus Query 175315 CCAGGTACGGGAAAGACCCTCCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC 175374 || || ||||| |||||||| | ||| || |||||||||||| | || || || ||| Sbjct 354 CCCGGCACGGGTAAGACCCTGTTGGCCAAGGCTATCGCGGGTGAAGCCAAGGTGCCTTTC 413 Query 175375 ATCCAGTGCTCTGCCGCAAACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTT 175434 || ||| | | | |||| ||||||||||||||||| ||||| || | || Sbjct 414 TTCACCATCTCGGGCTCTGACTTCGTGGAGATGTTTGTTGGCGTGGGCGCAGCCCGTGTG 473 Query 175435 CGCGATCTCTTTGAAATCGCCCGCGAAAATC-AACCATGTATTGTCTTCATTGATGAGAT 175493 ||||| | || || | || ||| | | ||| || || |||||||||| || || Sbjct 474 CGCGACATGTTCGAGCAAG-CCAAGAAGAGCGCACCCTGCATCATCTTCATTGACGAAAT 532 Query 175494 TGATGCGGTGGGCAAGCAACGCAGCGCTGG--TGGTATGCCAGCAAATGACGAGAGAGAA 175551 || || || || || || | ||||| ||| | | ||||||||| | || Sbjct 533 CGACGCTGTCGGTCGCCATCGTGGTGCTGGCCTGGGCGG--TGGCAATGACGAGCGCGAG 590 Query 175552 CAAACAATTAATCAACTACTCACCGAGATGGATGGCTTTGA---CAATGAGACTGGCATT 175608 || || | || || | || ||||||||| |||||||| ||| || ||| Sbjct 591 CAGACCCTCAACCAGATGCTGGTCGAGATGGACGGCTTTGAGACCAACCTCGGTGTCATC 650 Query 175609 GTGGTTATTGCGGCCACTAATCGCGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGT 175668 ||| || |||||||| || ||| ||| ||||| || |||| | || ||||| || Sbjct 651 GTG---ATGGCGGCCACCAACCGCCCGGACATCCTGGACCCCGCCTTGCTGCGCCCAGGC 707 Query 175669 CGTTTTGATCGCAAGATCCAAGTGGGTCTTCCAAGTGTGCGAGGTCGCAAGAAGAT 175724 || ||||| ||| || || | || || ||| | || |||||| || |||| Sbjct 708 CGATTTGACCGCCAGGTCTATGTCACGCTGCCAGACATCCGTGGTCGCGAGCAGAT 763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596435371840000