Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_021348.1 Length=156558 Score E Sequences producing significant alignments: (Bits) Value seq13448 98.7 1e-15 seq8969 84.2 2e-11 >seq13448 Length=225520 Score = 98.7 bits (108), Expect = 1e-15 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 115639 ACCTACGGCATCCTGGTCTACCAGGAGCAGCTGATCCGCACCGCCAAGGAGCTGGCCGGG 115698 |||||||||||| |||||||||| |||||| |||| | |||||| ||| ||||| ||| Sbjct 20399 ACCTACGGCATCATGGTCTACCAAGAGCAGGTGATGCAGACCGCCCAGGTGCTGGGCGGC 20340 Query 115699 TTCACCCCGGGCGAGGCCGAGCGGCTGCGTAAGGGCATCGGCAAGAAGAAGATGGAG 115755 | || || ||||| ||||| |||||| || ||| |||||||||||| |||| Sbjct 20339 TACAGCCTGGGCGGCGCCGACATGCTGCGCCGGGCCATGGGCAAGAAGAAGGCGGAG 20283 >seq8969 Length=73153 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 96730 GCGAAGGTAGCTCAGCTGGTAGAGCGCCACCTTGCCAAGGTGGAGGTCGCGGGATCGTAA 96789 ||||| ||||||||| |||||||||| ||||||||||||| |||||||||| ||| | Sbjct 3834 GCGAAAGTAGCTCAGTTGGTAGAGCGTAACCTTGCCAAGGTTAAGGTCGCGGGTTCGAGA 3893 Query 96790 CCCGTTCTTCGCTC 96803 ||||| ||||||| Sbjct 3894 CCCGTCTTTCGCTC 3907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500744907040000