Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_021782.1 Length=72098 Score E Sequences producing significant alignments: (Bits) Value seq1 86.0 3e-12 >seq1 Length=2207822 Score = 86.0 bits (94), Expect = 3e-12 Identities = 137/193 (71%), Gaps = 8/193 (4%) Strand=Plus/Minus Query 8023 GCAGCAATGATTCTTCCTCGTTCAGGTCTGGGCCATAAGCATGGTGTAGTGCTTGGGAAC 8082 || || ||||| || || || || || || ||||||||||| || | |||| |||| | Sbjct 1381757 GCGGCCATGATCCTGCCGCGCTCGGGGCTTGGCCATAAGCACGGCATCGTGC-TGGGCAA 1381699 Query 8083 CTTACTGGTC-TGATTGATTCAGACTATCAGGGTGAACTTATGGTAAGCCTCTGGAATC- 8140 ||| ||| | |||| || |||||||| |||||| | || ||||| ||| |||||| | Sbjct 1381698 CTTGGTGGGCTTGATCGACTCAGACTACCAGGGTCAGCTCATGGTGAGCTGCTGGAACCG 1381639 Query 8141 --GCTCTACAGAGCCTTTTACTGTTAACCCTGGTGACCGTATTGCTCAGATGGTAATCGT 8198 |||| || | |||| || | | || || || ||||| || ||||| ||||| Sbjct 1381638 GGGCTCCACCG---CTTTCACCATCGAGCCCATGGAGCGCATTGCGCAAATGGTCATCGT 1381582 Query 8199 GCCTGTAATGCAG 8211 ||| || ||||| Sbjct 1381581 GCCGGTGGTGCAG 1381569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230538214582000