Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_021804.1 Length=28760 Score E Sequences producing significant alignments: (Bits) Value seq11726 86.0 1e-12 >seq11726 Length=335128 Score = 86.0 bits (94), Expect = 1e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26448 GGAAATAGAGAGCAGGAAATTAGCGGTATATCAAGAAGGTTAAAAATGTTAGCTAAAGAA 26507 ||||| |||||||| |||||| || || ||| |||||| | ||||||||| Sbjct 214396 GGAAACAGAGAGCAAGAAATTTCTATGATTTCTAGATCATTAAAAGCTATTGCTAAAGAA 214337 Query 26508 CTGCAGGTGCCTATAATTGCTTTATGTCAATTATCTAGGGCTGTAGAAACTCGTGGTGGT 26567 | | || ||| ||||||| | | ||| | || || || || ||||| | ||||| Sbjct 214336 TTAGAAGTACCTGTAATTGCCCTCTCTCAGCTTTCAAGAGCCGTGGAAACCAGAGGTGGA 214277 Query 26568 TCTAAACGTCCTTTGTTATCAGATTTGCGTGAATCAGGTGCAATAGAGCAGGATGCAGAT 26627 ||| | || | || || ||| | | || ||||| || || ||||| |||||||| Sbjct 214276 AGCAAAAGACCCCTTTTGTCGGATCTTAGAGAGTCAGGAGCCATTGAGCAAGATGCAGAC 214217 Query 26628 ATAGTAGAGTTTATTTATAGACCAGATTATTA 26659 || ||| |||||||||||||| |||||| Sbjct 214216 ATTGTAAGTTTTATTTATAGACCTAGTTATTA 214185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 91890754152000