Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq12782 109 5e-19 >seq12782 Length=242876 Score = 109 bits (120), Expect = 5e-19 Identities = 102/127 (80%), Gaps = 2/127 (2%) Strand=Plus/Plus Query 34506 CGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTC 34565 ||||||||| | || ||||||||||||||| |||||||||||||| ||||| ||||| Sbjct 43223 CGCCTTGGCAACGTCCACCATGTTGACGATGACCGTCTTGATGCCGTTACCCTTGCCTTC 43282 Query 34566 GACCTTGGCGCAGATGC-GCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACATTGCGGT 34624 ||||| || || || ||||| ||||| |||||||||||||||| || |||||| Sbjct 43283 CACCTTAGC-CATCAGCTTAGGCATCTTGTAACGGTAGAACGCGTCCGTGACGCTGCGGT 43341 Query 34625 TAACGTT 34631 | ||||| Sbjct 43342 TCACGTT 43348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412751032874000